EnhancerDB
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  3. rs550088707[chr5:148838288]
Enhancers that have rs550088707[chr5:148838288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148806414 148838675 enh22700
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550088707[chr5:148838288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148838276 148838290 PLAG1 JASPAR yes 66817104
chr5 148838286 148838296 SP1 JASPAR yes 66817106
chr5 148838287 148838297 SP1 JASPAR yes 66817107
chr5 148838288 148838292 LFA1 TRANSFAC yes 66817108
Genes associated with rs550088707[chr5:148838288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More