EnhancerDB
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  3. rs550090622[chr17:55501078]
Enhancers that have rs550090622[chr17:55501078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550090622[chr17:55501078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55501066 55501081 MEF2C JASPAR yes 54953950
chr17 55501067 55501082 MEF2A JASPAR yes 54953951
chr17 55501068 55501080 HNF1B JASPAR yes 54953952
chr17 55501074 55501078 TEAD2 TRANSFAC yes 54953953
chr17 55501074 55501079 TBP TRANSFAC yes 54953954
chr17 55501074 55501080 TFIID TRANSFAC yes 54953955
Genes associated with rs550090622[chr17:55501078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More