EnhancerDB
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  3. rs550116108[chr17:30879996]
Enhancers that have rs550116108[chr17:30879996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 30876099 30888642 enh4363
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550116108[chr17:30879996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 30879983 30879997 JUN JASPAR yes 53889377
chr17 30879995 30880004 PITX3 JASPAR yes 53889379
chr17 30879995 30880005 GSC2 JASPAR yes 53889380
chr17 30879995 30880005 GSC JASPAR yes 53889381
chr17 30879996 30880004 RHOXF1 JASPAR yes 53889382
Genes associated with rs550116108[chr17:30879996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More