EnhancerDB
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  3. rs550163548[chr1:155192613]
Enhancers that have rs550163548[chr1:155192613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs550163548[chr1:155192613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155191923 155197612 ZNF274 GTRD no Cervix (HeLa-S3) 21341379
chr1 155191925 155196309 ZNF274 GTRD no Cervix (HeLa-S3) 21341380
chr1 155192250 155196614 ZNF274 GTRD no Cervix (HeLa-S3) 21341381
chr1 155192353 155195582 ZNF143 GTRD no Epithelial (MCF-7) 21341382
chr1 155192365 155195220 ZNF143 GTRD no Epithelial (MCF-7) 21341383
chr1 155192377 155195191 ZNF143 GTRD no Epithelial (MCF-7) 21341384
chr1 155192407 155197777 ZNF274 GTRD no Cervix (HeLa-S3) 21341385
chr1 155192410 155194044 TCF7L2 GTRD no Colon (HCT116) 21341386
chr1 155192472 155194050 TCF7L2 GTRD no Colon (HCT116) 21341387
chr1 155192480 155195491 TCF7L2 GTRD no Colon (HCT116) 21341388
chr1 155192508 155195258 ZNF143 GTRD no Epithelial (MCF-7) 21341389
chr1 155192515 155195947 ZNF274 GTRD no Cervix (HeLa-S3) 21341390
chr1 155192528 155195611 TCF7L2 GTRD no Colon (HCT116) 21341391
chr1 155192531 155194350 ZNF143 GTRD no Epithelial (MCF-7) 21341392
chr1 155192537 155194783 ZNF143 GTRD no Epithelial (MCF-7) 21341393
chr1 155192571 155195551 ZNF143 GTRD no Epithelial (MCF-7) 21341394
chr1 155192600 155195736 TCF7L2 GTRD no Colon (HCT116) 21341395
chr1 155192605 155192620 FOXA1 JASPAR yes 32336195
chr1 155192606 155192618 FOXI1 JASPAR yes 32336196
chr1 155192607 155192619 FOXC2 JASPAR yes 32336197
chr1 155192607 155192621 ONECUT3 JASPAR yes 32336198
chr1 155192608 155192619 FOXB1 JASPAR yes 32336199
chr1 155192608 155192619 FOXC1 JASPAR yes 32336200
chr1 155192608 155192624 POU4F2 JASPAR yes 32336201
chr1 155192608 155192624 POU4F3 JASPAR yes 32336202
chr1 155192609 155192613 YY1 TRANSFAC yes 32336203
chr1 155192609 155192624 FOXA1 JASPAR yes 32336204
chr1 155192610 155192622 FOXI1 JASPAR yes 32336205
chr1 155192610 155192624 POU4F1 JASPAR yes 32336206
chr1 155192610 155192625 FOXP1 JASPAR yes 32336207
chr1 155192610 155192625 HNF1A JASPAR yes 32336208
chr1 155192611 155192623 FOXC2 JASPAR yes 32336209
chr1 155192611 155192625 ONECUT2 JASPAR yes 32336210
chr1 155192611 155192625 ONECUT3 JASPAR yes 32336211
chr1 155192612 155192623 FOXB1 JASPAR yes 32336212
chr1 155192612 155192623 FOXC1 JASPAR yes 32336213
chr1 155192612 155192623 PROP1 JASPAR yes 32336214
chr1 155192613 155192617 YY1 TRANSFAC yes 32336215
chr1 155192613 155192628 FOXA1 JASPAR yes 32336216
Genes associated with rs550163548[chr1:155192613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More