EnhancerDB
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  3. rs550166600[chr1:19259855]
Enhancers that have rs550166600[chr1:19259855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550166600[chr1:19259855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19259844 19259855 ESRRA JASPAR yes 27162725
chr1 19259854 19259868 STAT1 JASPAR yes 27162727
chr1 19259854 19259869 STAT2 JASPAR yes 27162728
Genes associated with rs550166600[chr1:19259855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More