EnhancerDB
  1. Home
  2. SNP
  3. rs550175669[chr19:13948182]
Enhancers that have rs550175669[chr19:13948182]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550175669[chr19:13948182]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13946403 13948393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851698
chr19 13947558 13948242 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851708
chr19 13947661 13948194 ZNF274 GTRD no Blood (GM12878) 21851714
chr19 13947855 13948319 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21851737
chr19 13948182 13948196 RORA JASPAR yes 112536255
Genes associated with rs550175669[chr19:13948182], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More