EnhancerDB
  1. Home
  2. SNP
  3. rs550197149[chr1:229344169]
Enhancers that have rs550197149[chr1:229344169]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs550197149[chr1:229344169]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229343833 229344217 ZNF274 GTRD no Cervix (HeLa-S3) 21390727
chr1 229344163 229344178 FOXP1 JASPAR yes 35974465
chr1 229344166 229344187 IRF1 JASPAR yes 35974466
chr1 229344167 229344188 IRF1 JASPAR yes 35974467
Genes associated with rs550197149[chr1:229344169], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More