EnhancerDB
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  3. rs550204480[chr12:46785962]
Enhancers that have rs550204480[chr12:46785962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46774225 46791355 enh14675
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550204480[chr12:46785962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46785950 46785971 IRF1 JASPAR yes 120614657
chr12 46785952 46785967 PRDM1 JASPAR yes 120614658
chr12 46785953 46785968 STAT2 JASPAR yes 120614659
chr12 46785954 46785968 STAT1 JASPAR yes 120614660
chr12 46785957 46785974 RXRA JASPAR yes 120614661
chr12 46785958 46785963 ETS2 TRANSFAC yes 120614662
chr12 46785958 46785973 PRDM1 JASPAR yes 120614663
Genes associated with rs550204480[chr12:46785962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More