EnhancerDB
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  3. rs550225964[chr1:212105259]
Enhancers that have rs550225964[chr1:212105259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs550225964[chr1:212105259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212104430 212105299 ZNF274 GTRD no Bone Marrow (K562) 21377707
chr1 212105180 212106902 ZNF274 GTRD no Bone Marrow (K562) 21377716
chr1 212105256 212105271 FOXP1 JASPAR yes 35093174
chr1 212105257 212105272 FOXP1 JASPAR yes 35093175
chr1 212105257 212105278 IRF1 JASPAR yes 35093176
chr1 212105258 212105273 FOXP1 JASPAR yes 35093177
Genes associated with rs550225964[chr1:212105259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More