EnhancerDB
  1. Home
  2. SNP
  3. rs550234248[chr16:29279175]
Enhancers that have rs550234248[chr16:29279175]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550234248[chr16:29279175]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29279017 29279465 ZNF274 GTRD no Liver (HepG2) 21702067
chr16 29279157 29279178 IRF1 JASPAR yes 10255938
Genes associated with rs550234248[chr16:29279175], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More