EnhancerDB
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  3. rs550235496[chr12:125003175]
Enhancers that have rs550235496[chr12:125003175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550235496[chr12:125003175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21580922
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108068800
chr12 125003160 125003178 RARA JASPAR yes 124387832
chr12 125003167 125003185 NR3C1 JASPAR yes 124387833
Genes associated with rs550235496[chr12:125003175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More