EnhancerDB
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  3. rs550286350[chr17:41522954]
Enhancers that have rs550286350[chr17:41522954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs550286350[chr17:41522954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41518767 41523144 ZNF274 GTRD no Cervix (HeLa-S3) 21760266
chr17 41518935 41523274 ZNF143 GTRD no Epithelial (MCF-7) 21760279
chr17 41519281 41523404 ZNF143 GTRD no Epithelial (MCF-7) 21760293
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520592 41523202 ZNF274 GTRD no Cervix (HeLa-S3) 21760303
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520682 41523128 ZNF143 GTRD no Epithelial (MCF-7) 21760306
chr17 41520752 41523269 ZBTB33 GTRD no Lung (A549) 21760308
chr17 41520753 41523251 ZNF274 GTRD no Cervix (HeLa-S3) 21760309
chr17 41520763 41523291 ZBTB33 GTRD no Lung (A549) 21760310
chr17 41520780 41523106 ZNF143 GTRD no Epithelial (MCF-7) 21760312
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520851 41522969 ZNF274 GTRD no Cervix (HeLa-S3) 21760315
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41520865 41523267 ZNF143 GTRD no Epithelial (MCF-7) 21760317
chr17 41520917 41523271 ZNF143 GTRD no Epithelial (MCF-7) 21760318
chr17 41520940 41523192 ZNF143 GTRD no Epithelial (MCF-7) 21760320
chr17 41520946 41522984 ZNF143 GTRD no Epithelial (MCF-7) 21760321
chr17 41521024 41522990 ZNF143 GTRD no Epithelial (MCF-7) 21760322
chr17 41521048 41523231 ZNF143 GTRD no Epithelial (MCF-7) 21760324
chr17 41521079 41523235 ZNF143 GTRD no Epithelial (MCF-7) 21760327
chr17 41521086 41523080 ZNF143 GTRD no Epithelial (MCF-7) 21760328
chr17 41521230 41523026 ZNF143 GTRD no Epithelial (MCF-7) 21760332
chr17 41521230 41523224 ZNF143 GTRD no Epithelial (MCF-7) 21760333
chr17 41521275 41523016 ZNF274 GTRD no Cervix (HeLa-S3) 21760335
chr17 41521288 41523174 ZBTB33 GTRD no Lung (A549) 21760338
chr17 41521414 41523064 ZNF143 GTRD no Epithelial (MCF-7) 21760345
chr17 41521480 41523135 ZNF143 GTRD no Epithelial (MCF-7) 21760349
chr17 41521519 41523005 AR GTRD no Prostate (PC-3) 21760353
chr17 41521714 41523138 ZNF143 GTRD no Epithelial (MCF-7) 21760374
chr17 41521715 41523091 ZNF143 GTRD no Epithelial (MCF-7) 21760375
chr17 41521733 41523090 ZNF143 GTRD no Epithelial (MCF-7) 21760378
chr17 41522226 41523068 ZNF143 GTRD no Epithelial (MCF-7) 21760392
chr17 41522231 41523046 ZBTB33 GTRD no Lung (A549) 21760393
chr17 41522360 41523082 ZNF143 GTRD no Epithelial (MCF-7) 21760395
chr17 41522370 41523151 ZNF143 GTRD no Epithelial (MCF-7) 21760396
chr17 41522484 41523077 ZNF143 GTRD no Epithelial (MCF-7) 21760397
chr17 41522680 41523275 ZBTB33 GTRD no Lung (A549) 21760398
chr17 41522703 41523025 ZNF274 GTRD no Liver (HepG2) 21760399
chr17 41522948 41522963 SOX21 JASPAR yes 54347349
chr17 41522948 41522964 SOX4 JASPAR yes 54347350
chr17 41522948 41522964 SOX8 JASPAR yes 54347351
Genes associated with rs550286350[chr17:41522954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More