EnhancerDB
  1. Home
  2. SNP
  3. rs550320783[chr1:54770078]
Enhancers that have rs550320783[chr1:54770078]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs550320783[chr1:54770078]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54770059 54770079 RREB1 JASPAR yes 28971005
chr1 54770063 54770083 RREB1 JASPAR yes 28971006
chr1 54770066 54770087 ZNF263 JASPAR yes 28971008
chr1 54770067 54770088 ZNF263 JASPAR yes 28971010
chr1 54770068 54770080 INSM1 JASPAR yes 28971011
chr1 54770068 54770088 RREB1 JASPAR yes 28971012
chr1 54770069 54770089 RREB1 JASPAR yes 28971013
chr1 54770069 54770090 ZNF263 JASPAR yes 28971014
chr1 54770070 54770080 GCM2 JASPAR yes 28971015
chr1 54770071 54770081 ZNF740 JASPAR yes 28971016
chr1 54770073 54770083 SP1 JASPAR yes 28971017
chr1 54770076 54770081 SP1 TRANSFAC yes 28971018
chr1 54770077 54770087 ZNF740 JASPAR yes 28971019
chr1 54770078 54770083 TFAP2A TRANSFAC yes 28971020
chr1 54770078 54770084 MZF1 JASPAR yes 28971021
chr1 54770078 54770088 SP1 JASPAR yes 28971022
Genes associated with rs550320783[chr1:54770078], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More