EnhancerDB
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  3. rs550329892[chr1:27924975]
Enhancers that have rs550329892[chr1:27924975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27924687 27925144 vista934
VISTA
Transcript factors that have rs550329892[chr1:27924975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27924743 27925263 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802599
chr1 27924961 27924982 ZNF263 JASPAR yes 27714512
chr1 27924961 27924982 ZNF263 JASPAR yes 118258914
chr1 27924967 27924984 RARA JASPAR yes 27714515
chr1 27924967 27924984 RARA JASPAR yes 118258917
Genes associated with rs550329892[chr1:27924975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More