EnhancerDB
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  3. rs550337270[chr1:155191864]
Enhancers that have rs550337270[chr1:155191864]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs550337270[chr1:155191864]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155191795 155192531 ZNF143 GTRD no Epithelial (MCF-7) 21341368
chr1 155191806 155192521 ZNF143 GTRD no Epithelial (MCF-7) 21341369
chr1 155191815 155192515 ZNF143 GTRD no Epithelial (MCF-7) 21341370
chr1 155191823 155192501 ZNF143 GTRD no Epithelial (MCF-7) 21341371
chr1 155191826 155192455 ZNF143 GTRD no Epithelial (MCF-7) 21341372
chr1 155191840 155192419 ZNF143 GTRD no Epithelial (MCF-7) 21341373
chr1 155191844 155192376 ZNF143 GTRD no Epithelial (MCF-7) 21341374
chr1 155191851 155192369 ZNF143 GTRD no Epithelial (MCF-7) 21341375
chr1 155191854 155191868 TLX1 JASPAR yes 32336117
chr1 155191855 155191869 TLX1 JASPAR yes 32336118
chr1 155191856 155192290 TCF7L2 GTRD no Colon (HCT116) 21341376
chr1 155191864 155192288 ZNF143 GTRD no Epithelial (MCF-7) 21341377
Genes associated with rs550337270[chr1:155191864], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More