EnhancerDB
  1. Home
  2. SNP
  3. rs550395321[chr17:39057953]
Enhancers that have rs550395321[chr17:39057953]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550395321[chr17:39057953]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39056362 39057983 ZBTB33 GTRD no Lung (A549) 21757022
chr17 39057500 39058026 ZBTB33 GTRD no Lung (A549) 21757069
chr17 39057939 39057957 RARA JASPAR yes 54241910
chr17 39057945 39058601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757070
chr17 39057949 39057969 ESR1 JASPAR yes 54241912
chr17 39057952 39057970 ESR1 JASPAR yes 54241913
chr17 39057952 39057970 ESR2 JASPAR yes 54241914
chr17 39057953 39057971 ESR2 JASPAR yes 54241915
chr17 39057953 39057971 NR3C1 JASPAR yes 54241916
Genes associated with rs550395321[chr17:39057953], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More