EnhancerDB
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  3. rs550396038[chr11:72454412]
Enhancers that have rs550396038[chr11:72454412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72444521 72462512 enh1866
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550396038[chr11:72454412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72454279 72455586 ZBTB33 GTRD no Lung (A549) 107988658
chr11 72454279 72455586 ZBTB33 GTRD no Lung (A549) 107988659
chr11 72454359 72455441 ZNF143 GTRD no Epithelial (MCF-7) 107988660
chr11 72454359 72455441 ZNF143 GTRD no Epithelial (MCF-7) 107988661
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 21501994
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 107988662
chr11 72454384 72455615 ZNF274 GTRD no Bone Marrow (K562) 107988663
chr11 72454406 72454426 RREB1 JASPAR yes 39700994
chr11 72454407 72454427 RREB1 JASPAR yes 39700995
chr11 72454408 72454418 SP1 JASPAR yes 39700996
chr11 72454408 72454428 RREB1 JASPAR yes 39700997
chr11 72454409 72454429 RREB1 JASPAR yes 39700998
chr11 72454410 72454420 ZNF740 JASPAR yes 39700999
chr11 72454410 72454430 RREB1 JASPAR yes 39701000
chr11 72454410 72454431 ZNF263 JASPAR yes 39701001
chr11 72454411 72454423 INSM1 JASPAR yes 39701002
chr11 72454412 72454432 RREB1 JASPAR yes 39701003
chr11 72454412 72455293 ZNF143 GTRD no Epithelial (MCF-7) 107988664
chr11 72454412 72455293 ZNF143 GTRD no Epithelial (MCF-7) 107988665
Genes associated with rs550396038[chr11:72454412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More