EnhancerDB
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  3. rs550438805[chr19:13958093]
Enhancers that have rs550438805[chr19:13958093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13957204 13959386 vista28720
VISTA
Transcript factors that have rs550438805[chr19:13958093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13957196 13959039 POLR2A UCSC Txn Factor no Conserved 108390205
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852271
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390211
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852277
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390218
chr19 13957444 13958114 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390269
chr19 13957556 13958160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852339
chr19 13957556 13958160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390288
chr19 13957584 13958148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852343
chr19 13957584 13958148 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390294
chr19 13957594 13958141 JUN UCSC Txn Factor no Conserved 108390296
chr19 13957650 13958180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852346
chr19 13957650 13958180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390298
chr19 13957654 13958170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852347
chr19 13957654 13958170 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390299
chr19 13957654 13958230 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390300
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 21852348
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 108390301
chr19 13957671 13958167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852349
chr19 13957671 13958167 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390302
chr19 13957688 13958264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852351
chr19 13957688 13958264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390305
chr19 13957689 13958153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852352
chr19 13957689 13958153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390306
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 21852353
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 108390307
chr19 13957716 13958116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852354
chr19 13957716 13958116 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390309
chr19 13957717 13958251 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390310
chr19 13957717 13958332 EP300 UCSC Txn Factor no Conserved 108390311
chr19 13957718 13958390 ZNF274 GTRD no Bone Marrow (K562) 21852355
chr19 13957718 13958390 ZNF274 GTRD no Bone Marrow (K562) 108390312
chr19 13957728 13958128 FOS UCSC Txn Factor no Conserved 108390313
chr19 13957736 13958120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852356
chr19 13957736 13958120 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390315
chr19 13957736 13958200 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852357
chr19 13957736 13958200 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390316
chr19 13957737 13958231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852358
chr19 13957737 13958231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390317
chr19 13957738 13958101 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852359
chr19 13957738 13958101 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390318
chr19 13957738 13958127 JUND UCSC Txn Factor no Conserved 108390319
chr19 13957739 13958103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852360
chr19 13957739 13958103 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390320
chr19 13957751 13958295 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852362
chr19 13957751 13958295 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390322
chr19 13957758 13958262 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390326
chr19 13957774 13958253 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390329
chr19 13957782 13958102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852366
chr19 13957782 13958102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390330
chr19 13957787 13958243 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852367
chr19 13957787 13958243 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390331
chr19 13957793 13958455 ZNF274 GTRD no Bone Marrow (K562) 21852368
chr19 13957793 13958455 ZNF274 GTRD no Bone Marrow (K562) 108390332
chr19 13957801 13958141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852372
chr19 13957801 13958141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390337
chr19 13957803 13958243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852373
chr19 13957803 13958243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390338
chr19 13957804 13958144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852374
chr19 13957804 13958144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390339
chr19 13957807 13958127 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390341
chr19 13957813 13958117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852376
chr19 13957813 13958117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390342
chr19 13957824 13958111 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852377
chr19 13957824 13958111 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390343
chr19 13957833 13958890 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390349
chr19 13957843 13958319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852382
chr19 13957843 13958319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390350
chr19 13957846 13958426 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390351
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 21852384
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 108390353
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852386
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390355
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 21852388
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 108390357
chr19 13957893 13958217 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390359
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 21852390
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 108390360
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 21852391
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 108390361
chr19 13957903 13958313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852392
chr19 13957903 13958313 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390362
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 21852393
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 108390363
chr19 13957920 13958290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852394
chr19 13957920 13958290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390364
chr19 13957922 13958302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852395
chr19 13957922 13958302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390365
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 21852397
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 108390367
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 21852398
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 108390368
chr19 13957931 13958151 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852399
chr19 13957931 13958151 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390369
chr19 13957942 13958332 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852401
chr19 13957942 13958332 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390371
chr19 13957944 13958344 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852402
chr19 13957944 13958344 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390372
chr19 13957950 13958286 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852403
chr19 13957950 13958286 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390373
chr19 13957950 13958334 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852404
chr19 13957950 13958334 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390374
chr19 13957950 13958341 RFX5 UCSC Txn Factor no Conserved 108390375
chr19 13957957 13958233 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852405
chr19 13957957 13958233 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390376
chr19 13957964 13958473 TCF7L2 GTRD no Colon (HCT116) 21852406
chr19 13957964 13958473 TCF7L2 GTRD no Colon (HCT116) 108390377
chr19 13957971 13958281 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390378
chr19 13957971 13958427 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852407
chr19 13957971 13958427 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390379
chr19 13957972 13958428 ZNF274 GTRD no Bone Marrow (K562) 21852408
chr19 13957972 13958428 ZNF274 GTRD no Bone Marrow (K562) 108390380
chr19 13957973 13958309 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21852409
chr19 13957973 13958309 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108390381
chr19 13957977 13958341 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852410
chr19 13957977 13958341 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390382
chr19 13957978 13958322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852411
chr19 13957978 13958322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390383
chr19 13957985 13958265 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390384
chr19 13957986 13958450 ZNF274 GTRD no Bone Marrow (K562) 21852412
chr19 13957986 13958450 ZNF274 GTRD no Bone Marrow (K562) 108390385
chr19 13957987 13958317 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852413
chr19 13957987 13958317 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390386
chr19 13957992 13958439 TCF7L2 GTRD no Colon (HCT116) 21852414
chr19 13957992 13958439 TCF7L2 GTRD no Colon (HCT116) 108390387
chr19 13957997 13958301 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852415
chr19 13957997 13958301 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390388
chr19 13957997 13958327 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390389
chr19 13957999 13958335 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852416
chr19 13957999 13958335 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390390
chr19 13958000 13958336 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852417
chr19 13958000 13958336 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390391
chr19 13958013 13958303 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852418
chr19 13958013 13958303 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390392
chr19 13958015 13958271 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852419
chr19 13958015 13958271 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390393
chr19 13958015 13958395 ZNF274 GTRD no Bone Marrow (K562) 21852420
chr19 13958015 13958395 ZNF274 GTRD no Bone Marrow (K562) 108390394
chr19 13958018 13958364 ZNF274 GTRD no Bone Marrow (K562) 21852421
chr19 13958018 13958364 ZNF274 GTRD no Bone Marrow (K562) 108390395
chr19 13958035 13958435 ZNF143 GTRD no Epithelial (MCF-7) 21852422
chr19 13958035 13958435 ZNF143 GTRD no Epithelial (MCF-7) 108390396
chr19 13958050 13958369 ZNF274 GTRD no Bone Marrow (K562) 21852423
chr19 13958050 13958369 ZNF274 GTRD no Bone Marrow (K562) 108390397
chr19 13958053 13958429 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852424
chr19 13958053 13958429 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390398
chr19 13958062 13958262 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852425
chr19 13958062 13958262 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390399
chr19 13958071 13958341 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852426
chr19 13958071 13958341 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390400
chr19 13958080 13958376 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21852427
chr19 13958080 13958376 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108390401
chr19 13958082 13958372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852428
chr19 13958082 13958372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390402
chr19 13958084 13958097 NFKB1 JASPAR yes 70810550
chr19 13958084 13958097 NFKB2 JASPAR yes 70810551
chr19 13958084 13958097 NFKB1 JASPAR yes 112537781
chr19 13958084 13958097 NFKB2 JASPAR yes 112537782
chr19 13958085 13958096 NFKB1 JASPAR yes 70810552
chr19 13958085 13958096 NFKB1 JASPAR yes 112537783
chr19 13958085 13958098 NFKB2 JASPAR yes 70810553
chr19 13958085 13958098 NFKB2 JASPAR yes 112537784
chr19 13958085 13958398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390403
chr19 13958086 13958099 NFKB2 JASPAR yes 70810554
chr19 13958086 13958099 NFKB2 JASPAR yes 112537785
chr19 13958086 13958390 ZNF274 GTRD no Bone Marrow (K562) 21852429
chr19 13958086 13958390 ZNF274 GTRD no Bone Marrow (K562) 108390404
chr19 13958090 13958102 E2F8 JASPAR yes 70810555
chr19 13958090 13958102 E2F8 JASPAR yes 112537786
chr19 13958090 13958111 ZNF263 JASPAR yes 70810556
chr19 13958090 13958111 ZNF263 JASPAR yes 112537787
chr19 13958091 13958111 RREB1 JASPAR yes 70810557
chr19 13958091 13958111 RREB1 JASPAR yes 112537788
chr19 13958091 13958112 ZNF263 JASPAR yes 70810558
chr19 13958091 13958112 ZNF263 JASPAR yes 112537789
chr19 13958092 13958102 ZNF740 JASPAR yes 70810559
chr19 13958092 13958102 ZNF740 JASPAR yes 112537790
Genes associated with rs550438805[chr19:13958093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More