EnhancerDB
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  3. rs550508250[chr11:72448618]
Enhancers that have rs550508250[chr11:72448618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72444521 72462512 enh1866
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550508250[chr11:72448618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72448483 72449356 ZNF143 GTRD no Epithelial (MCF-7) 107988562
chr11 72448539 72449398 ZNF143 GTRD no Epithelial (MCF-7) 107988563
chr11 72448600 72449402 ZNF274 GTRD no Bone Marrow (K562) 21501914
chr11 72448600 72449402 ZNF274 GTRD no Bone Marrow (K562) 107988564
chr11 72448616 72448620 YY1 TRANSFAC yes 39700108
chr11 72448617 72448627 NFIA JASPAR yes 39700109
chr11 72448618 72448627 NFIX JASPAR yes 39700110
Genes associated with rs550508250[chr11:72448618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More