-
Home
- SNP
- rs550520599[chr12:49628898]
Enhancers that have rs550520599[chr12:49628898]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
49623729 |
49631475 |
enh2326 |
|
|
Transcript factors that have rs550520599[chr12:49628898]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
49628032
|
49629257
|
MYC
|
UCSC Txn Factor
|
no
|
Conserved
|
108030126
|
|
|
chr12
|
49628274
|
49629025
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108030204
|
|
|
chr12
|
49628369
|
49629025
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108030243
|
|
|
chr12
|
49628893
|
49628908
|
MEF2C
|
JASPAR
|
yes
|
|
120767114
|
|
|
chr12
|
49628896
|
49628911
|
FOXP1
|
JASPAR
|
yes
|
|
120767115
|
|
|
chr12
|
49628897
|
49628912
|
FOXP1
|
JASPAR
|
yes
|
|
120767116
|
|
|
chr12
|
49628898
|
49628913
|
FOXP1
|
JASPAR
|
yes
|
|
120767117
|
|
|
chr12
|
49628898
|
49628919
|
IRF1
|
JASPAR
|
yes
|
|
120767118
|
|
Genes associated with rs550520599[chr12:49628898], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |