EnhancerDB
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  3. rs550542902[chr1:110330904]
Enhancers that have rs550542902[chr1:110330904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550542902[chr1:110330904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110330267 110331177 ZNF274 GTRD no Liver (HepG2) 21327159
chr1 110330757 110331154 ZNF274 GTRD no Liver (HepG2) 21327163
chr1 110330762 110331229 ZNF274 GTRD no Liver (HepG2) 21327164
chr1 110330763 110331132 ZNF274 GTRD no Liver (HepG2) 21327165
chr1 110330780 110331148 ZNF274 GTRD no Liver (HepG2) 21327166
chr1 110330782 110331144 ZNF274 GTRD no Liver (HepG2) 21327167
chr1 110330783 110331144 ZNF274 GTRD no Bone Marrow (K562) 21327168
chr1 110330793 110331147 ZNF274 GTRD no Liver (HepG2) 21327169
chr1 110330795 110331168 ZNF274 GTRD no Bone Marrow (K562) 21327170
chr1 110330801 110331180 ZNF274 GTRD no Bone Marrow (K562) 21327171
chr1 110330804 110330984 ZNF274 GTRD no Liver (HepG2) 21327172
chr1 110330805 110331123 ZNF274 GTRD no Bone Marrow (K562) 21327173
chr1 110330810 110331113 ZNF274 GTRD no Bone Marrow (K562) 21327174
chr1 110330810 110331136 ZNF274 GTRD no Liver (HepG2) 21327175
chr1 110330904 110330908 LFA1 TRANSFAC yes 31438437
Genes associated with rs550542902[chr1:110330904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More