EnhancerDB
  1. Home
  2. SNP
  3. rs550563875[chr6:42250307]
Enhancers that have rs550563875[chr6:42250307]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42241485 42251615 enh49102
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Bone (Osteoblast) Lung Lung (A549) Stomach Uterus Thymus Heart
Transcript factors that have rs550563875[chr6:42250307]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42250288 42250308 RREB1 JASPAR yes 101704046
chr6 42250293 42250313 RREB1 JASPAR yes 101704049
chr6 42250297 42250317 RREB1 JASPAR yes 101704050
chr6 42250302 42250322 RREB1 JASPAR yes 101704051
chr6 42250307 42250322 IRF9 JASPAR yes 101704052
chr6 42250307 42250327 RREB1 JASPAR yes 101704053
Genes associated with rs550563875[chr6:42250307], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More