EnhancerDB
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Enhancers that have rs550569773[chr17:25833611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550569773[chr17:25833611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25833382 25833766 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748083
chr17 25833382 25833766 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245631
chr17 25833410 25833740 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748084
chr17 25833410 25833740 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245632
chr17 25833498 25833666 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748085
chr17 25833498 25833666 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245633
chr17 25833521 25834181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748086
chr17 25833521 25834181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245634
chr17 25833564 25834100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748087
chr17 25833564 25834100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245635
chr17 25833568 25833978 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748088
chr17 25833568 25833978 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245636
chr17 25833573 25834163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748089
chr17 25833573 25834163 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245637
chr17 25833587 25834183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21748090
chr17 25833587 25834183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108245638
chr17 25833610 25833620 NHLH1 JASPAR yes 53638440
Genes associated with rs550569773[chr17:25833611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More