EnhancerDB
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  3. rs550576818[chr12:46958187]
Enhancers that have rs550576818[chr12:46958187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550576818[chr12:46958187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46958171 46958192 IRF1 JASPAR yes 120639020
chr12 46958175 46958187 IRF1 JASPAR yes 120639021
chr12 46958175 46958189 IRF7 JASPAR yes 120639022
chr12 46958175 46958190 IRF9 JASPAR yes 120639023
chr12 46958183 46958189 TCF4 TRANSFAC yes 120639024
Genes associated with rs550576818[chr12:46958187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More