EnhancerDB
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Enhancers that have rs550576878[chr16:29268726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550576878[chr16:29268726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29268013 29268754 ZNF143 GTRD no Epithelial (MCF-7) 21701937
chr16 29268061 29268925 ZNF274 GTRD no Cervix (HeLa-S3) 21701939
chr16 29268314 29268759 ZNF143 GTRD no Epithelial (MCF-7) 21701942
chr16 29268321 29268769 ZNF143 GTRD no Epithelial (MCF-7) 21701943
chr16 29268324 29268843 ZNF274 GTRD no Liver (HepG2) 21701944
chr16 29268326 29268818 ZNF143 GTRD no Epithelial (MCF-7) 21701945
chr16 29268367 29268793 ZNF274 GTRD no Liver (HepG2) 21701946
chr16 29268379 29268948 ZNF274 GTRD no Liver (HepG2) 21701948
chr16 29268446 29270076 ZNF274 GTRD no Cervix (HeLa-S3) 21701949
chr16 29268451 29268761 ZNF274 GTRD no Cervix (HeLa-S3) 21701950
chr16 29268525 29269892 ZBTB33 GTRD no Brain (SK-N-SH) 21701952
chr16 29268545 29269285 ZNF274 GTRD no Liver (HepG2) 21701953
chr16 29268609 29269886 ZBTB33 GTRD no Brain (SK-N-SH) 21701954
chr16 29268617 29269871 ZBTB33 GTRD no Brain (SK-N-SH) 21701955
chr16 29268618 29269244 ZNF274 GTRD no Cervix (HeLa-S3) 21701956
chr16 29268660 29268920 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21701957
chr16 29268671 29268941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21701958
chr16 29268672 29269897 ZNF274 GTRD no Cervix (HeLa-S3) 21701959
chr16 29268678 29269694 ZNF274 GTRD no Cervix (HeLa-S3) 21701960
chr16 29268685 29269202 ZNF274 GTRD no Cervix (HeLa-S3) 21701961
chr16 29268688 29269372 ZNF274 GTRD no Cervix (HeLa-S3) 21701962
chr16 29268689 29268939 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21701963
chr16 29268694 29268924 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21701964
chr16 29268697 29269816 ZBTB33 GTRD no Brain (SK-N-SH) 21701965
chr16 29268708 29269701 ZBTB33 GTRD no Brain (SK-N-SH) 21701966
chr16 29268712 29268942 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21701967
chr16 29268721 29268940 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21701968
chr16 29268722 29269789 ZBTB33 GTRD no Brain (SK-N-SH) 21701969
chr16 29268726 29268736 RELA JASPAR yes 10254552
Genes associated with rs550576878[chr16:29268726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More