EnhancerDB
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  3. rs550578631[chr1:116088440]
Enhancers that have rs550578631[chr1:116088440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116084825 116092215 enh12178
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Breast Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550578631[chr1:116088440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116086979 116088494 ZNF274 GTRD no Bone Marrow (K562) 107823668
chr1 116086979 116088494 ZNF274 GTRD no Bone Marrow (K562) 107823669
chr1 116088352 116088728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107823675
chr1 116088357 116088701 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331218
chr1 116088357 116088701 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823676
chr1 116088359 116088769 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107823677
chr1 116088369 116088689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331219
chr1 116088369 116088689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823678
chr1 116088375 116088665 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107823679
chr1 116088385 116088725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331220
chr1 116088385 116088725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823680
chr1 116088385 116089055 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107823681
chr1 116088387 116088917 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331221
chr1 116088387 116088917 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823682
chr1 116088389 116088619 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331222
chr1 116088389 116088619 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823683
chr1 116088405 116088655 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107823684
chr1 116088414 116088918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331223
chr1 116088414 116088918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823685
chr1 116088421 116088711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331224
chr1 116088421 116088711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823686
chr1 116088423 116088753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331225
chr1 116088423 116088753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823687
chr1 116088429 116088685 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331226
chr1 116088429 116088685 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823688
chr1 116088432 116088688 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107823689
chr1 116088433 116088448 ZIC3 JASPAR yes 31746700
chr1 116088433 116088448 ZIC4 JASPAR yes 31746701
chr1 116088440 116088446 MAZ TRANSFAC yes 31746702
Genes associated with rs550578631[chr1:116088440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More