EnhancerDB
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  3. rs550581454[chr1:52024000]
Enhancers that have rs550581454[chr1:52024000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550581454[chr1:52024000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52023983 52024003 RREB1 JASPAR yes 28850396
chr1 52023984 52024004 RREB1 JASPAR yes 28850397
chr1 52023996 52024002 SP1 TRANSFAC yes 28850398
chr1 52023996 52024006 SP1 JASPAR yes 28850399
Genes associated with rs550581454[chr1:52024000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More