EnhancerDB
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  3. rs550584091[chr17:49015992]
Enhancers that have rs550584091[chr17:49015992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550584091[chr17:49015992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771303
chr17 49013194 49016195 ZNF143 GTRD no Epithelial (MCF-7) 21771304
chr17 49013881 49016117 ZNF143 GTRD no Epithelial (MCF-7) 21771328
chr17 49013881 49016117 ZNF143 GTRD no Epithelial (MCF-7) 21771329
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771342
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771343
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771360
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771361
chr17 49015271 49017444 ZNF143 GTRD no Epithelial (MCF-7) 21771363
chr17 49015459 49016298 ZNF143 GTRD no Epithelial (MCF-7) 21771364
chr17 49015471 49016310 ZNF143 GTRD no Epithelial (MCF-7) 21771365
chr17 49015654 49016252 ZNF143 GTRD no Epithelial (MCF-7) 21771366
chr17 49015659 49016042 ZNF143 GTRD no Epithelial (MCF-7) 21771367
chr17 49015700 49016030 ZNF143 GTRD no Epithelial (MCF-7) 21771368
chr17 49015700 49016033 ZNF143 GTRD no Epithelial (MCF-7) 21771369
chr17 49015730 49016155 ZNF143 GTRD no Epithelial (MCF-7) 21771370
chr17 49015982 49015997 MEF2A JASPAR yes 54736473
chr17 49015983 49015998 MEF2C JASPAR yes 54736474
chr17 49015983 49017186 ZNF143 GTRD no Epithelial (MCF-7) 21771371
chr17 49015984 49015996 MEF2A JASPAR yes 54736475
chr17 49015984 49015996 MEF2B JASPAR yes 54736476
chr17 49015984 49015996 MEF2D JASPAR yes 54736477
Genes associated with rs550584091[chr17:49015992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More