EnhancerDB
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  3. rs550617315[chr12:125021226]
Enhancers that have rs550617315[chr12:125021226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550617315[chr12:125021226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125021211 125021226 AR JASPAR yes 124390481
chr12 125021221 125021231 FIGLA JASPAR yes 124390482
chr12 125021221 125021231 ID4 JASPAR yes 124390483
chr12 125021221 125021231 TCF3 JASPAR yes 124390484
chr12 125021221 125021231 TCF4 JASPAR yes 124390485
chr12 125021223 125021228 USF2 TRANSFAC yes 124390486
Genes associated with rs550617315[chr12:125021226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More