EnhancerDB
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  3. rs550630301[chr12:116940388]
Enhancers that have rs550630301[chr12:116940388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs550630301[chr12:116940388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116939997 116940531 ZNF143 GTRD no Epithelial (MCF-7) 21577126
chr12 116940382 116940391 NKX2-8 JASPAR yes 124003650
chr12 116940382 116940392 NKX2-3 JASPAR yes 124003651
Genes associated with rs550630301[chr12:116940388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More