EnhancerDB
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  3. rs550667195[chr1:36713471]
Enhancers that have rs550667195[chr1:36713471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36701987 36724964 enh240
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550667195[chr1:36713471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36713462 36713476 SPI1 JASPAR yes 28129697
chr1 36713465 36713486 IRF1 JASPAR yes 28129698
chr1 36713466 36713487 IRF1 JASPAR yes 28129699
chr1 36713467 36713488 IRF1 JASPAR yes 28129700
chr1 36713468 36713483 FOXP1 JASPAR yes 28129701
chr1 36713468 36713489 IRF1 JASPAR yes 28129702
chr1 36713469 36713490 IRF1 JASPAR yes 28129703
chr1 36713470 36713485 FOXP1 JASPAR yes 28129704
chr1 36713470 36713491 IRF1 JASPAR yes 28129705
chr1 36713471 36713486 FOXP1 JASPAR yes 28129706
chr1 36713471 36713492 IRF1 JASPAR yes 28129707
Genes associated with rs550667195[chr1:36713471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More