EnhancerDB
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  3. rs550677628[chr2:26274797]
Enhancers that have rs550677628[chr2:26274797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550677628[chr2:26274797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26274794 26274803 ZEB1 JASPAR yes 72519022
chr2 26274795 26274805 ID4 JASPAR yes 72519023
chr2 26274795 26274805 TCF3 JASPAR yes 72519024
chr2 26274795 26274805 TCF4 JASPAR yes 72519025
chr2 26274796 26274805 SNAI2 JASPAR yes 72519026
chr2 26274797 26274802 USF2 TRANSFAC yes 72519027
Genes associated with rs550677628[chr2:26274797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More