EnhancerDB
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  3. rs550690947[chr17:73424263]
Enhancers that have rs550690947[chr17:73424263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73418765 73428832 enh17376
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550690947[chr17:73424263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73423132 73424406 TCF7L2 GTRD no Colon (HCT116) 21787951
chr17 73423628 73424413 TCF7L2 GTRD no Colon (HCT116) 21787957
chr17 73423668 73424338 TCF7L2 GTRD no Colon (HCT116) 21787958
chr17 73423793 73424350 TCF7L2 GTRD no Colon (HCT116) 21787959
chr17 73424257 73424267 SP1 JASPAR yes 55956315
chr17 73424257 73424276 PAX5 JASPAR yes 55956316
chr17 73424260 73424265 SP1 TRANSFAC yes 55956317
Genes associated with rs550690947[chr17:73424263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More