EnhancerDB
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  3. rs550763161[chr2:38938304]
Enhancers that have rs550763161[chr2:38938304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550763161[chr2:38938304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38938298 38938319 IRF1 JASPAR yes 73168465
chr2 38938302 38938317 FOXP1 JASPAR yes 73168466
chr2 38938303 38938318 FOXP1 JASPAR yes 73168467
chr2 38938304 38938319 FOXP1 JASPAR yes 73168468
Genes associated with rs550763161[chr2:38938304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More