EnhancerDB
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  3. rs550771572[chr16:85651202]
Enhancers that have rs550771572[chr16:85651202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85640485 85664563 enh16874
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Liver Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs550771572[chr16:85651202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216765
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216766
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216768
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216769
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216772
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216773
chr16 85649246 85654064 TCF7L2 GTRD no Colon (HCT116) 108216816
chr16 85649308 85653175 TCF7L2 GTRD no Colon (HCT116) 108216817
chr16 85649545 85653540 ZNF274 GTRD no Bone Marrow (K562) 21730812
chr16 85649545 85653540 ZNF274 GTRD no Bone Marrow (K562) 108216819
chr16 85650109 85651914 TCF7L2 GTRD no Colon (HCT116) 108216822
chr16 85650542 85651461 TCF7L2 GTRD no Colon (HCT116) 108216878
chr16 85651194 85651209 NR2C2 JASPAR yes 12084392
chr16 85651194 85651215 ZNF263 JASPAR yes 12084393
chr16 85651195 85651215 RREB1 JASPAR yes 12084394
chr16 85651195 85651216 ZNF263 JASPAR yes 12084395
chr16 85651196 85651216 RREB1 JASPAR yes 12084396
chr16 85651197 85651207 SP1 JASPAR yes 12084397
chr16 85651197 85651217 RREB1 JASPAR yes 12084398
chr16 85651198 85651208 SP1 JASPAR yes 12084399
chr16 85651198 85651218 RREB1 JASPAR yes 12084400
chr16 85651199 85651219 RREB1 JASPAR yes 12084401
chr16 85651200 85651210 SP1 JASPAR yes 12084402
chr16 85651200 85651210 ZNF740 JASPAR yes 12084403
chr16 85651201 85651211 SP1 JASPAR yes 12084404
chr16 85651201 85651211 ZNF740 JASPAR yes 12084405
chr16 85651202 85651212 SP1 JASPAR yes 12084406
chr16 85651202 85651212 ZNF740 JASPAR yes 12084407
Genes associated with rs550771572[chr16:85651202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More