EnhancerDB
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  3. rs550794936[chr16:17490832]
Enhancers that have rs550794936[chr16:17490832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17466580 17495935 enh3923
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Adrenal Blood (Karpas-422) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
chr16 17490710 17491056 vista22051
VISTA
Transcript factors that have rs550794936[chr16:17490832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17490821 17490835 TLX1 JASPAR yes 9805340
chr16 17490821 17490835 TLX1 JASPAR yes 49350754
chr16 17490822 17490836 TLX1 JASPAR yes 9805341
chr16 17490822 17490836 TLX1 JASPAR yes 49350755
Genes associated with rs550794936[chr16:17490832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More