EnhancerDB
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  3. rs550838180[chr15:63178520]
Enhancers that have rs550838180[chr15:63178520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 63164919 63196455 enh16214
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550838180[chr15:63178520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 63177711 63178745 ZNF274 GTRD no Cervix (HeLa-S3) 21657121
chr15 63177842 63178690 ZNF143 GTRD no Epithelial (MCF-7) 21657123
chr15 63177912 63178526 ZNF143 GTRD no Epithelial (MCF-7) 21657125
chr15 63177998 63178607 ZNF274 GTRD no Cervix (HeLa-S3) 21657133
chr15 63178032 63178824 ZNF143 GTRD no Epithelial (MCF-7) 21657140
chr15 63178040 63178573 ZNF274 GTRD no Bone Marrow (K562) 21657143
chr15 63178483 63178873 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21657149
chr15 63178508 63178521 EOMES JASPAR yes 23928895
chr15 63178509 63178522 SMAD2 JASPAR yes 23928902
chr15 63178513 63178524 FOSL2 JASPAR yes 23928903
chr15 63178515 63178531 ZNF143 JASPAR yes 23928904
chr15 63178520 63178530 SP1 JASPAR yes 23928905
Genes associated with rs550838180[chr15:63178520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More