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- rs550838236[chr16:17545877]
Enhancers that have rs550838236[chr16:17545877]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
17540471 |
17563535 |
enh3927 |
|
|
| chr16 |
17545858 |
17546183 |
vista22059 |
|
|
Transcript factors that have rs550838236[chr16:17545877]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
17545665
|
17546277
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108186259
|
|
|
chr16
|
17545703
|
17546171
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108186260
|
|
|
chr16
|
17545776
|
17545937
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
21694892
|
|
|
chr16
|
17545776
|
17545937
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108186261
|
|
|
chr16
|
17545874
|
17545879
|
SP1
|
TRANSFAC
|
yes
|
|
9811007
|
|
|
chr16
|
17545874
|
17545879
|
SP1
|
TRANSFAC
|
yes
|
|
49351109
|
|
Genes associated with rs550838236[chr16:17545877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |