EnhancerDB
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  3. rs550845891[chr12:125031831]
Enhancers that have rs550845891[chr12:125031831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550845891[chr12:125031831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031826 125031834 TBX5 JASPAR yes 124392314
chr12 125031826 125031835 ZEB1 JASPAR yes 124392315
chr12 125031826 125031839 ZBTB18 JASPAR yes 124392316
chr12 125031827 125031837 ID4 JASPAR yes 124392317
chr12 125031827 125031837 TCF3 JASPAR yes 124392318
chr12 125031827 125031837 TCF4 JASPAR yes 124392319
chr12 125031829 125031834 USF2 TRANSFAC yes 124392320
Genes associated with rs550845891[chr12:125031831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More