EnhancerDB
  1. Home
  2. SNP
  3. rs550868856[chr5:148282223]
Enhancers that have rs550868856[chr5:148282223]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs550868856[chr5:148282223]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148282221 148282242 IRF1 JASPAR yes 66771510
chr5 148282223 148282238 STAT2 JASPAR yes 66771511
Genes associated with rs550868856[chr5:148282223], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More