EnhancerDB
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  3. rs550870963[chr3:152859178]
Enhancers that have rs550870963[chr3:152859178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152853205 152865539 enh36001
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550870963[chr3:152859178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 152859166 152859187 IRF1 JASPAR yes 6747172
chr3 152859169 152859183 SPI1 JASPAR yes 6747173
chr3 152859170 152859191 IRF1 JASPAR yes 6747174
chr3 152859172 152859193 IRF1 JASPAR yes 6747175
chr3 152859173 152859194 IRF1 JASPAR yes 6747176
chr3 152859174 152859195 IRF1 JASPAR yes 6747177
chr3 152859175 152859190 FOXP1 JASPAR yes 6747178
chr3 152859175 152859196 IRF1 JASPAR yes 6747179
chr3 152859176 152859197 IRF1 JASPAR yes 6747180
chr3 152859177 152859192 FOXP1 JASPAR yes 6747181
chr3 152859177 152859198 IRF1 JASPAR yes 6747182
chr3 152859178 152859193 FOXP1 JASPAR yes 6747183
chr3 152859178 152859199 IRF1 JASPAR yes 6747184
Genes associated with rs550870963[chr3:152859178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More