EnhancerDB
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  3. rs550875339[chr16:11419617]
Enhancers that have rs550875339[chr16:11419617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
chr16 11419517 11419755 vista21861
VISTA
Transcript factors that have rs550875339[chr16:11419617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11419308 11419844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690581
chr16 11419308 11419844 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181506
chr16 11419352 11419828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108181507
chr16 11419432 11419788 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690582
chr16 11419432 11419788 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181508
chr16 11419472 11419908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690583
chr16 11419472 11419908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181509
chr16 11419473 11419909 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690584
chr16 11419473 11419909 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181510
chr16 11419475 11419911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690585
chr16 11419475 11419911 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181511
chr16 11419476 11419996 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690586
chr16 11419476 11419996 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181512
chr16 11419511 11419947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690587
chr16 11419511 11419947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181513
chr16 11419528 11419764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690588
chr16 11419528 11419764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181514
chr16 11419529 11419939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690589
chr16 11419529 11419939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181515
chr16 11419537 11419817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690590
chr16 11419537 11419817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181516
chr16 11419594 11419864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690591
chr16 11419594 11419864 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181517
chr16 11419598 11419618 TP63 JASPAR yes 9505743
chr16 11419598 11419618 TP63 JASPAR yes 49341280
chr16 11419612 11419866 SPI1 UCSC Txn Factor no Conserved 108181518
chr16 11419616 11419634 IRF2 JASPAR yes 9505744
chr16 11419616 11419634 IRF2 JASPAR yes 49341281
chr16 11419617 11419638 IRF1 JASPAR yes 9505745
chr16 11419617 11419638 IRF1 JASPAR yes 49341282
Genes associated with rs550875339[chr16:11419617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More