EnhancerDB
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  3. rs550904680[chr16:16059761]
Enhancers that have rs550904680[chr16:16059761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 16045445 16094717 enh3913
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550904680[chr16:16059761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 16059758 16059773 FOXP1 JASPAR yes 9756720
chr16 16059759 16059770 FOXA1 JASPAR yes 9756721
chr16 16059761 16059772 FOXP2 JASPAR yes 9756722
Genes associated with rs550904680[chr16:16059761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More