EnhancerDB
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  3. rs550911046[chr2:28880025]
Enhancers that have rs550911046[chr2:28880025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550911046[chr2:28880025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28880019 28880029 REL JASPAR yes 72665259
chr2 28880022 28880027 H4TF1 TRANSFAC yes 72665260
chr2 28880023 28880031 FEV JASPAR yes 72665261
chr2 28880024 28880039 LEF1 JASPAR yes 72665262
chr2 28880025 28880030 ETS2 TRANSFAC yes 72665263
chr2 28880025 28880039 TCF7L2 JASPAR yes 72665264
Genes associated with rs550911046[chr2:28880025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More