EnhancerDB
  1. Home
  2. SNP
  3. rs550929641[chr3:56964079]
Enhancers that have rs550929641[chr3:56964079]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs550929641[chr3:56964079]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56964072 56964082 ZNF740 JASPAR yes 2612825
chr3 56964073 56964083 SP1 JASPAR yes 2612826
chr3 56964073 56964083 ZNF740 JASPAR yes 2612827
chr3 56964074 56964084 MZF1 JASPAR yes 2612828
chr3 56964074 56964084 SP1 JASPAR yes 2612829
chr3 56964074 56964084 ZNF740 JASPAR yes 2612830
chr3 56964075 56964085 SP1 JASPAR yes 2612831
chr3 56964076 56964096 RREB1 JASPAR yes 2612832
chr3 56964077 56964083 SP1 TRANSFAC yes 2612833
chr3 56964077 56964087 SP1 JASPAR yes 2612834
chr3 56964077 56964087 ZNF740 JASPAR yes 2612835
Genes associated with rs550929641[chr3:56964079], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More