EnhancerDB
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  3. rs550938423[chr1:110336010]
Enhancers that have rs550938423[chr1:110336010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 110335775 110336041 vista2868
VISTA
Transcript factors that have rs550938423[chr1:110336010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110335007 110336246 ZNF274 GTRD no Liver (HepG2) 21327265
chr1 110335007 110336246 ZNF274 GTRD no Liver (HepG2) 107819611
chr1 110335007 110336246 ZNF274 GTRD no Liver (HepG2) 107819612
chr1 110335010 110336056 ZNF274 GTRD no Liver (HepG2) 21327267
chr1 110335010 110336056 ZNF274 GTRD no Liver (HepG2) 107819614
chr1 110335010 110336056 ZNF274 GTRD no Liver (HepG2) 107819615
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 21327280
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 107819629
chr1 110335612 110337414 ZNF274 GTRD no Bone Marrow (K562) 107819630
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 21327281
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819631
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819632
chr1 110335762 110340839 ZNF274 GTRD no Cervix (HeLa-S3) 107819633
chr1 110335773 110336976 ZNF274 GTRD no Cervix (HeLa-S3) 21327282
chr1 110335773 110336976 ZNF274 GTRD no Cervix (HeLa-S3) 107819634
chr1 110335773 110336976 ZNF274 GTRD no Cervix (HeLa-S3) 107819635
chr1 110335793 110336117 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327283
chr1 110335793 110336117 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819636
chr1 110335824 110336080 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107819637
chr1 110335824 110336934 ZNF274 GTRD no Cervix (HeLa-S3) 21327284
chr1 110335824 110336934 ZNF274 GTRD no Cervix (HeLa-S3) 107819638
chr1 110335832 110336096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327285
chr1 110335832 110336096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107819639
chr1 110335856 110336080 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21327286
chr1 110335856 110336080 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107819640
chr1 110335879 110336189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327287
chr1 110335879 110336189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819641
chr1 110335924 110336967 TCF7L2 GTRD no Colon (HCT116) 21327288
chr1 110335924 110336967 TCF7L2 GTRD no Colon (HCT116) 107819642
chr1 110335924 110336967 TCF7L2 GTRD no Colon (HCT116) 107819643
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 21327289
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819644
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819645
chr1 110335928 110342180 ZNF274 GTRD no Bone Marrow (K562) 107819646
chr1 110335960 110337042 TCF7L2 GTRD no Colon (HCT116) 21327290
chr1 110335960 110337042 TCF7L2 GTRD no Colon (HCT116) 107819647
chr1 110335960 110337042 TCF7L2 GTRD no Colon (HCT116) 107819648
chr1 110336008 110336412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327291
chr1 110336008 110336412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107819649
Genes associated with rs550938423[chr1:110336010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More