EnhancerDB
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  3. rs550939779[chr11:116883565]
Enhancers that have rs550939779[chr11:116883565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 116878105 116884440 enh29181
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs550939779[chr11:116883565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 116881997 116883894 AR GTRD no Prostate (PC-3) 21516051
chr11 116881997 116883894 AR GTRD no Prostate (PC-3) 108000173
chr11 116883559 116883580 IRF1 JASPAR yes 41707171
chr11 116883561 116883582 IRF1 JASPAR yes 41707172
chr11 116883562 116883583 IRF1 JASPAR yes 41707173
chr11 116883563 116883584 IRF1 JASPAR yes 41707174
chr11 116883564 116883579 FOXP1 JASPAR yes 41707175
chr11 116883564 116883585 IRF1 JASPAR yes 41707176
chr11 116883565 116883580 FOXP1 JASPAR yes 41707177
chr11 116883565 116883586 IRF1 JASPAR yes 41707178
Genes associated with rs550939779[chr11:116883565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More