EnhancerDB
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  3. rs550942219[chr1:16499467]
Enhancers that have rs550942219[chr1:16499467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550942219[chr1:16499467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16497372 16500088 ZNF274 GTRD no Bone Marrow (K562) 107802224
chr1 16497372 16500088 ZNF274 GTRD no Bone Marrow (K562) 107802225
chr1 16499449 16499470 IRF1 JASPAR yes 27030976
chr1 16499450 16499471 IRF1 JASPAR yes 27030978
chr1 16499451 16499472 IRF1 JASPAR yes 27030980
chr1 16499452 16499467 FOXP1 JASPAR yes 27030981
chr1 16499452 16499473 IRF1 JASPAR yes 27030982
chr1 16499453 16499468 FOXP1 JASPAR yes 27030983
chr1 16499453 16499474 IRF1 JASPAR yes 27030984
chr1 16499454 16499469 FOXP1 JASPAR yes 27030985
chr1 16499454 16499475 IRF1 JASPAR yes 27030986
chr1 16499455 16499470 FOXP1 JASPAR yes 27030987
chr1 16499455 16499476 IRF1 JASPAR yes 27030988
chr1 16499456 16499471 FOXP1 JASPAR yes 27030989
chr1 16499456 16499477 IRF1 JASPAR yes 27030990
chr1 16499457 16499472 FOXP1 JASPAR yes 27030991
chr1 16499459 16499474 FOXP1 JASPAR yes 27030992
chr1 16499460 16499481 IRF1 JASPAR yes 27030993
chr1 16499461 16499476 FOXP1 JASPAR yes 27030994
chr1 16499462 16499483 IRF1 JASPAR yes 27030995
chr1 16499466 16499481 PRDM1 JASPAR yes 27030996
chr1 16499466 16499487 IRF1 JASPAR yes 27030997
chr1 16499467 16499488 IRF1 JASPAR yes 27030998
Genes associated with rs550942219[chr1:16499467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More