EnhancerDB
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  3. rs550965636[chr19:11048700]
Enhancers that have rs550965636[chr19:11048700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550965636[chr19:11048700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11048473 11048834 ZNF274 GTRD no Bone Marrow (K562) 21849202
chr19 11048488 11048807 ZNF143 GTRD no Epithelial (MCF-7) 21849203
chr19 11048497 11048738 ZNF143 GTRD no Epithelial (MCF-7) 21849204
chr19 11048682 11048703 IRF1 JASPAR yes 112446308
chr19 11048682 11048703 ZNF263 JASPAR yes 112446309
chr19 11048690 11048711 IRF1 JASPAR yes 112446311
chr19 11048693 11048706 ELF1 JASPAR yes 112446312
chr19 11048693 11048707 SPI1 JASPAR yes 112446313
chr19 11048693 11048707 SPIC JASPAR yes 112446314
chr19 11048694 11048715 IRF1 JASPAR yes 112446315
chr19 11048695 11048716 IRF1 JASPAR yes 112446316
chr19 11048696 11048701 ETS2 TRANSFAC yes 112446317
chr19 11048696 11048717 IRF1 JASPAR yes 112446318
chr19 11048697 11048718 IRF1 JASPAR yes 112446319
chr19 11048698 11048713 FOXP1 JASPAR yes 112446320
chr19 11048698 11048719 IRF1 JASPAR yes 112446321
chr19 11048699 11048714 FOXP1 JASPAR yes 112446322
chr19 11048699 11048720 IRF1 JASPAR yes 112446323
chr19 11048700 11048715 FOXP1 JASPAR yes 112446324
Genes associated with rs550965636[chr19:11048700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More