EnhancerDB
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  3. rs550972102[chr17:55445916]
Enhancers that have rs550972102[chr17:55445916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550972102[chr17:55445916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55442218 55448102 ZNF274 GTRD no Liver (HepG2) 21773412
chr17 55442218 55448102 ZNF274 GTRD no Liver (HepG2) 108273843
chr17 55442320 55447389 ZNF274 GTRD no Liver (HepG2) 21773413
chr17 55442320 55447389 ZNF274 GTRD no Liver (HepG2) 108273844
chr17 55442573 55447451 ZNF274 GTRD no Liver (HepG2) 21773414
chr17 55442573 55447451 ZNF274 GTRD no Liver (HepG2) 108273845
chr17 55442617 55447556 ZNF274 GTRD no Liver (HepG2) 21773415
chr17 55442617 55447556 ZNF274 GTRD no Liver (HepG2) 108273846
chr17 55445554 55447370 ZNF274 GTRD no Liver (HepG2) 21773416
chr17 55445554 55447370 ZNF274 GTRD no Liver (HepG2) 108273847
chr17 55445729 55447340 ZNF274 GTRD no Liver (HepG2) 21773417
chr17 55445729 55447340 ZNF274 GTRD no Liver (HepG2) 108273848
chr17 55445908 55447339 ZNF274 GTRD no Liver (HepG2) 21773418
chr17 55445908 55447339 ZNF274 GTRD no Liver (HepG2) 108273849
chr17 55445913 55445928 FOXP1 JASPAR yes 54946999
chr17 55445914 55445935 IRF1 JASPAR yes 54947000
chr17 55445915 55445935 RREB1 JASPAR yes 54947001
chr17 55445916 55445927 FOXP2 JASPAR yes 54947002
Genes associated with rs550972102[chr17:55445916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More